API Reference
=============

Full autodoc reference for all calibration modules.


Analysis
--------

Types, patterns, export, and comparison.

.. automodule:: calibration.analysis
   :members:
   :undoc-members:


Morris Method
-------------

Morris Method screening (elementary effects).

.. automodule:: calibration.morris
   :members:
   :undoc-members:


OAT Sensitivity
----------------

One-at-a-time sensitivity analysis and pairwise interaction testing.

.. automodule:: calibration.sensitivity
   :members:
   :undoc-members:


Grid Building
-------------

Grid construction, YAML loading, validation, and combination generation.

.. automodule:: calibration.grid
   :members:
   :undoc-members:


Screening
---------

Single-seed grid screening with checkpointing.

.. automodule:: calibration.screening
   :members:
   :undoc-members:


Stability Testing
-----------------

Tiered stability testing with configurable ranking.

.. automodule:: calibration.stability
   :members:
   :undoc-members:


Serialization
-------------

Save/load for all result types, timestamped output directories.

.. automodule:: calibration.io
   :members:
   :undoc-members:


Reporting
---------

Auto-generated markdown reports.

.. automodule:: calibration.reporting
   :members:
   :undoc-members:


Rescreen
--------

Second-pass Morris screening after locking optimized params.

.. automodule:: calibration.rescreen
   :members:
   :undoc-members:


Cost Analysis
-------------

Targeted cost analysis for parameter value substitutions.

.. automodule:: calibration.cost
   :members:
   :undoc-members:


Cross-Scenario Evaluation
-------------------------

Cross-scenario evaluation with multiple ranking strategies.

.. automodule:: calibration.cross_eval
   :members:
   :undoc-members:


Structured Sweep
----------------

Multi-stage parameter sweep with carry-forward winners.

.. automodule:: calibration.sweep
   :members:
   :undoc-members:


Parameter Space
---------------

Parameter grids for all three scenarios.

.. automodule:: calibration.parameter_space
   :members:
   :undoc-members: